STRINGSTRING
PBAL39_20850 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20850" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20850Uncharacterized protein (95 aa)    
Predicted Functional Partners:
PBAL39_10116
Uncharacterized protein (258 aa)
   
          0.723
PBAL39_02297
Uncharacterized protein (134 aa)
   
          0.708
PBAL39_12438
Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) (176 aa)
   
          0.683
PBAL39_10111
Uncharacterized protein (931 aa)
   
          0.680
PBAL39_10975
Uncharacterized protein (250 aa)
   
          0.668
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.661
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.660
PBAL39_18374
Uncharacterized protein (252 aa)
   
          0.652
PBAL39_09816
Formiminoglutamase-related protein (393 aa)
   
          0.651
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
   
          0.650
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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