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PBAL39_20855 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_20855" - Arabinan endo-1,5-alpha-L-arabinosidase A in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_20855Arabinan endo-1,5-alpha-L-arabinosidase A (325 aa)    
Predicted Functional Partners:
PBAL39_21305
Putative endo-1,4-beta-xylanase (313 aa)
 
          0.882
PBAL39_22877
Putative hydrolase (344 aa)
          0.804
PBAL39_17274
Beta-xylosidase (1,4-beta-D-xylan xylosidase) (546 aa)
 
          0.777
PBAL39_12708
Glutaminase (812 aa)
   
          0.761
PBAL39_05868
Putative exported glutaminase (795 aa)
   
          0.761
PBAL39_16931
Glutaminase (824 aa)
   
          0.758
PBAL39_06716
Putative hydrolase (517 aa)
          0.718
PBAL39_01782
Uncharacterized protein (670 aa)
 
          0.705
PBAL39_03282
Uncharacterized protein (834 aa)
 
          0.687
PBAL39_19489
Putatuve glycosylhydrolase (357 aa)
       
0.613
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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