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PBAL39_21045 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21045" - Possible transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21045Possible transcriptional regulator (193 aa)    
Predicted Functional Partners:
PBAL39_21040
3-oxoacyl-[acyl-carrier-protein] reductase (263 aa)
              0.693
PBAL39_21050
Uncharacterized protein (237 aa)
              0.539
PBAL39_21035
Small multidrug resistance protein (110 aa)
   
   
  0.514
PBAL39_14864
Probable protein secretion protein, HlyD family (400 aa)
 
     
  0.480
PBAL39_17589
Transcriptional regulator, TetR family protein (203 aa)
   
          0.477
PBAL39_22340
Putative transport related membrane protein (1090 aa)
         
  0.431
PBAL39_19509
AcrB/AcrD/AcrF family protein (1021 aa)
         
  0.431
PBAL39_17764
Acriflavin resistance protein D (1068 aa)
         
  0.431
PBAL39_16821
Cation efflux protein (1042 aa)
         
  0.431
PBAL39_04443
Hydrophobe/amphiphile efflux-1 HAE1 (1055 aa)
         
  0.431
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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