STRINGSTRING
PBAL39_21125 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21125" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21125Uncharacterized protein (279 aa)    
Predicted Functional Partners:
PBAL39_21135
Putative two-component system sensor protein histidine kinase (337 aa)
              0.684
PBAL39_21130
Putative two-component response regulator autolysis regulator LytR (253 aa)
              0.684
PBAL39_18164
Outer membrane receptor for transport of vitamin B, putative (788 aa)
 
   
  0.657
PBAL39_08976
TonB-dependent outer membrane receptor (759 aa)
 
   
  0.657
PBAL39_08584
Uncharacterized protein (446 aa)
 
 
      0.575
PBAL39_19664
Transporter, putative (406 aa)
     
      0.506
PBAL39_10611
Major facilitator superfamily permease (438 aa)
     
      0.506
PBAL39_06626
Uncharacterized protein (149 aa)
   
          0.502
PBAL39_22740
Hydroxylase large subunit (750 aa)
     
      0.482
PBAL39_16114
Isoquinoline 1-oxidoreductase, beta subunit (752 aa)
     
      0.482
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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