STRINGSTRING
PBAL39_21185 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21185" - Putative endoribonuclease in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21185Putative endoribonuclease (176 aa)    
Predicted Functional Partners:
PBAL39_21190
Cyclic nucleotide binding-regulatory protein (187 aa)
 
          0.783
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.699
PBAL39_04573
Conserved protein found in conjugate transposon (213 aa)
   
          0.697
PBAL39_21115
Uncharacterized protein (506 aa)
   
          0.681
PBAL39_15219
Uncharacterized protein (414 aa)
   
          0.671
PBAL39_04548
TraM-like protein (308 aa)
   
          0.573
PBAL39_21180
Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB (462 aa)
              0.544
PBAL39_04568
Conserved transmembrane protein found in conjugative transposon (393 aa)
   
          0.537
PBAL39_07790
Uncharacterized protein (418 aa)
   
          0.518
PBAL39_10875
Uncharacterized protein (488 aa)
   
          0.516
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]