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PBAL39_21190 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21190" - Cyclic nucleotide binding-regulatory protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21190Cyclic nucleotide binding-regulatory protein (187 aa)    
Predicted Functional Partners:
PBAL39_21185
Putative endoribonuclease (176 aa)
 
          0.783
PBAL39_21195
Amidohydrolase (448 aa)
              0.569
PBAL39_21210
Uncharacterized protein (469 aa)
 
          0.514
PBAL39_21200
Thioredoxin family protein (367 aa)
              0.461
PBAL39_21205
Uncharacterized protein (855 aa)
              0.448
PBAL39_21215
Putative outer membrane protein (1151 aa)
              0.434
PBAL39_21180
Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB (462 aa)
              0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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