STRINGSTRING
PBAL39_21270 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21270" - DinB in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21270DinB (145 aa)    
Predicted Functional Partners:
PBAL39_11797
IG hypothetical 18565 (167 aa)
   
          0.680
PBAL39_05813
Uncharacterized protein (115 aa)
   
          0.652
PBAL39_23117
Uncharacterized protein (270 aa)
   
          0.624
PBAL39_01527
Zinc finger, CDGSH-type domain protein (74 aa)
   
          0.623
PBAL39_22720
Uncharacterized protein (119 aa)
   
          0.606
PBAL39_00250
Nuclease inhibitor (149 aa)
   
          0.534
PBAL39_10526
Uncharacterized protein (475 aa)
   
          0.525
PBAL39_10446
Uncharacterized protein (386 aa)
   
          0.522
PBAL39_21265
Uncharacterized protein (94 aa)
              0.502
PBAL39_02875
DinB (165 aa)
   
          0.498
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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