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PBAL39_21470 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21470" - Ferredoxin 2 with 4Fe-4S binding domain in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21470Ferredoxin 2 with 4Fe-4S binding domain (116 aa)    
Predicted Functional Partners:
PBAL39_21475
Uncharacterized protein (342 aa)
 
          0.874
PBAL39_14494
Transketolase (809 aa)
   
          0.538
PBAL39_21485
Cell-division ATP-binding protein (227 aa)
              0.530
PBAL39_21480
Uncharacterized protein (67 aa)
              0.530
PBAL39_10131
Uncharacterized protein (122 aa)
   
          0.528
PBAL39_06841
DNA-directed DNA polymerase (1477 aa)
   
          0.515
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
          0.430
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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