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EDM38698.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38698.1" - Ferredoxin, 2Fe-2S in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38698.1Ferredoxin, 2Fe-2S; COG0633 Ferredoxin (110 aa)    
Predicted Functional Partners:
EDM38697.1
COG2975 Uncharacterized protein conserved in bacteria (80 aa)
 
   
  0.925
EDM36570.1
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (137 aa)
 
  0.896
EDM38696.1
Uncharacterized protein; COG1778 Low specificity phosphatase (HAD superfamily) (175 aa)
              0.844
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the N-terminal section; belongs to the DHBP synthase family (403 aa)
     
 
  0.809
iscS
Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins (403 aa)
 
  0.803
EDM38700.1
COG1138 Cytochrome c biogenesis factor (821 aa)
 
          0.801
EDM38701.1
Uncharacterized protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
              0.770
EDM38317.1
COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family (876 aa)
         
  0.768
EDM38660.1
Co-chaperone Hsc20; COG1076 DnaJ-domain-containing proteins 1 (178 aa)
 
          0.768
EDM38699.1
Uncharacterized protein (252 aa)
              0.757
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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