STRINGSTRING
PBAL39_21540 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21540" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21540Uncharacterized protein (252 aa)    
Predicted Functional Partners:
PBAL39_21545
Cytochrome c-type biogenesis protein (821 aa)
              0.845
PBAL39_21550
Uncharacterized protein ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
              0.844
PBAL39_21525
Uncharacterized protein (175 aa)
              0.735
PBAL39_21535
Ferredoxin, 2Fe-2S (110 aa)
              0.713
PBAL39_21530
Uncharacterized protein (80 aa)
              0.663
panC
Pantoate-activating enzyme ; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate (263 aa)
   
        0.583
maf
Maf-like protein maf (189 aa)
              0.529
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.526
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.524
PBAL39_21555
Peptide-methionine (S)-S-oxide reductase ; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (242 aa)
              0.508
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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