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EDM38700.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38700.1" - COG1138 Cytochrome c biogenesis factor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
EDM38700.1COG1138 Cytochrome c biogenesis factor (821 aa)    
Predicted Functional Partners:
EDM38701.1
Uncharacterized protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
 
 
  0.992
EDM38709.1
COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component (244 aa)
 
   
  0.923
EDM38708.1
COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component (218 aa)
 
   
  0.890
EDM38699.1
Uncharacterized protein (252 aa)
              0.875
EDM38698.1
Ferredoxin, 2Fe-2S; COG0633 Ferredoxin (110 aa)
 
          0.801
EDM38697.1
COG2975 Uncharacterized protein conserved in bacteria (80 aa)
 
          0.715
EDM36299.1
annotation not available (213 aa)
   
          0.694
EDM38696.1
Uncharacterized protein; COG1778 Low specificity phosphatase (HAD superfamily) (175 aa)
              0.683
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing (1035 aa)
 
   
  0.658
EDM38275.1
Tetratricopeptide repeat domain protein; COG0457 FOG- TPR repeat (111 aa)
   
          0.633
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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