STRINGSTRING
PBAL39_21545 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21545" - Cytochrome c-type biogenesis protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21545Cytochrome c-type biogenesis protein (821 aa)    
Predicted Functional Partners:
PBAL39_21550
Uncharacterized protein ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
 
          0.972
PBAL39_21585
Possible ABC transport permease, cytochrome c biogenesis (218 aa)
 
   
  0.897
PBAL39_21590
Possible ABC transport permease, cytochrome c biogenesis (244 aa)
 
          0.846
PBAL39_21540
Uncharacterized protein (252 aa)
              0.845
PBAL39_21535
Ferredoxin, 2Fe-2S (110 aa)
 
          0.729
PBAL39_10546
Uncharacterized protein (268 aa)
   
          0.723
PBAL39_11662
ABC transporter, ATP-binding protein (205 aa)
 
     
  0.706
PBAL39_21530
Uncharacterized protein (80 aa)
              0.644
PBAL39_21525
Uncharacterized protein (175 aa)
              0.644
PBAL39_01227
Uncharacterized protein (1046 aa)
   
          0.611
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]