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PBAL39_21705 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21705" - Glycyl-tRNA synthetase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21705Glycyl-tRNA synthetase (29 aa)    
Predicted Functional Partners:
PBAL39_21700
Glycerophosphodiester phosphodiesterase (305 aa)
              0.665
PBAL39_21695
ABC-type multidrug transporter, ATP-binding protein gliding motility-associated protein (235 aa)
              0.665
glyQS
Glycyl-tRNA synthetase ; Catalyzes the attachment of glycine to tRNA(Gly) (493 aa)
              0.614
PBAL39_21690
Uncharacterized protein (176 aa)
              0.473
PBAL39_21720
Allergen V5/Tpx-1 related protein (227 aa)
              0.409
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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