STRINGSTRING
PBAL39_21740 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21740" - Probable dehydrogenase/reductase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21740Probable dehydrogenase/reductase (233 aa)    
Predicted Functional Partners:
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
  0.928
PBAL39_21735
Phenylalanine-4-hydroxylase (594 aa)
 
        0.917
PBAL39_14494
Transketolase (809 aa)
 
  0.900
PBAL39_04788
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
   
  0.884
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
   
 
  0.861
PBAL39_04658
Methionine synthase (1219 aa)
         
  0.837
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (959 aa)
   
 
  0.768
PBAL39_01517
Non-ribosomal peptide synthetase/polyketide synthase (2233 aa)
   
 
  0.761
PBAL39_14934
Putative short-chain dehydrogenase/reductase SDR (249 aa)
 
 
 
0.749
PBAL39_04798
Uncharacterized protein (194 aa)
 
          0.743
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (4%) [HD]