STRINGSTRING
PBAL39_21800 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21800" - Tetratricopeptide repeat-containing protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21800Tetratricopeptide repeat-containing protein (395 aa)    
Predicted Functional Partners:
PBAL39_21795
Uncharacterized protein (99 aa)
              0.624
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.594
PBAL39_09891
PKD (1990 aa)
   
          0.567
PBAL39_23117
Uncharacterized protein (270 aa)
   
          0.551
PBAL39_25045
Uncharacterized protein (226 aa)
   
          0.546
PBAL39_16991
Uncharacterized protein (228 aa)
   
          0.526
PBAL39_05163
Putative surface layer protein (408 aa)
   
          0.524
PBAL39_18259
Uncharacterized protein (249 aa)
   
          0.521
PBAL39_21720
Allergen V5/Tpx-1 related protein (227 aa)
   
          0.497
PBAL39_02312
Uncharacterized protein (229 aa)
   
          0.489
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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