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EDM38762.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38762.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38762.1Uncharacterized protein; COG0747 ABC-type dipeptide transport system, periplasmic component (121 aa)    
Predicted Functional Partners:
EDM38764.1
Uncharacterized protein; COG4564 Signal transduction histidine kinase (261 aa)
              0.845
EDM38763.1
Uncharacterized protein; COG0477 Permeases of the major facilitator superfamily (215 aa)
              0.845
EDM38765.1
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain (220 aa)
              0.826
EDM38761.1
annotation not available (263 aa)
              0.454
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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