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PBAL39_21915 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_21915" - TonB-dependent receptor domain protein in Pedobacter sp. BAL39
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_21915TonB-dependent receptor domain protein (967 aa)    
Predicted Functional Partners:
PBAL39_11602
Uncharacterized protein (416 aa)
   
          0.759
PBAL39_21920
Beta-lactam antibiotic acylase family protein (811 aa)
 
          0.694
PBAL39_23502
Putative orphan protein (158 aa)
   
          0.689
PBAL39_09631
Uncharacterized protein (86 aa)
   
          0.661
PBAL39_19639
Protein TonB ; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (281 aa)
   
          0.626
PBAL39_22325
Uncharacterized protein (51 aa)
   
          0.623
PBAL39_21930
Uncharacterized protein (327 aa)
 
          0.611
PBAL39_02127
Putative two-component system sensor protein histidine kinase (362 aa)
   
          0.595
PBAL39_06381
Uncharacterized protein (342 aa)
   
          0.572
PBAL39_01797
Putative exported outer membrane protein (502 aa)
   
          0.570
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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