STRINGSTRING
PBAL39_22305 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22305" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22305Uncharacterized protein (171 aa)    
Predicted Functional Partners:
PBAL39_12172
Uncharacterized protein (158 aa)
   
          0.714
PBAL39_22145
Uncharacterized protein (748 aa)
   
          0.707
PBAL39_05153
Putative outer membrane protein (604 aa)
   
          0.672
PBAL39_17604
Uncharacterized protein (836 aa)
   
          0.634
PBAL39_22345
Outer membrane efflux protein (457 aa)
   
          0.606
PBAL39_05148
Uncharacterized protein (1078 aa)
   
          0.603
PBAL39_22300
Uncharacterized protein (109 aa)
              0.590
PBAL39_17964
Uncharacterized protein (260 aa)
   
          0.575
PBAL39_22335
Efflux transporter, RND family, MFP subunit (360 aa)
   
          0.554
PBAL39_15159
Uncharacterized protein (402 aa)
   
          0.551
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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