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PBAL39_22335 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22335" - Efflux transporter, RND family, MFP subunit in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22335Efflux transporter, RND family, MFP subunit (360 aa)    
Predicted Functional Partners:
PBAL39_22340
Putative transport related membrane protein (1090 aa)
        0.954
PBAL39_22345
Outer membrane efflux protein (457 aa)
 
          0.933
PBAL39_04169
Cation efflux protein (1063 aa)
        0.690
PBAL39_19514
Membrane-fusion protein (330 aa)
   
          0.667
PBAL39_19509
AcrB/AcrD/AcrF family protein (1021 aa)
        0.662
PBAL39_22330
Uncharacterized protein (129 aa)
              0.653
PBAL39_16821
Cation efflux protein (1042 aa)
        0.651
PBAL39_04293
Multidrug efflux membrane fusion protein (1034 aa)
        0.647
PBAL39_22350
Signaling protein without kinase domain (339 aa)
 
          0.562
PBAL39_22305
Uncharacterized protein (171 aa)
   
          0.554
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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