STRINGSTRING
PBAL39_22390 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22390" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22390Transcriptional regulator (297 aa)    
Predicted Functional Partners:
PBAL39_22385
Uncharacterized protein (352 aa)
 
          0.817
PBAL39_22380
ABC transporter, ATP-binding subunit ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (245 aa)
              0.534
PBAL39_22370
DL-methionine transporter permease subunit (218 aa)
              0.534
PBAL39_03324
Uncharacterized protein (357 aa)
   
          0.497
metQ
Lipoprotein (269 aa)
              0.490
PBAL39_22615
Putative AraC family transcriptional regulator (301 aa)
   
          0.478
PBAL39_01292
Putative regulatory protein (190 aa)
   
          0.454
PBAL39_22395
Uncharacterized protein (95 aa)
              0.452
PBAL39_19055
Transcriptional regulator, AraC family protein (293 aa)
   
          0.411
PBAL39_22360
Uncharacterized protein (120 aa)
              0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (13%) [HD]