STRINGSTRING
PBAL39_22400 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22400" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22400Uncharacterized protein (574 aa)    
Predicted Functional Partners:
PBAL39_22405
Uncharacterized protein (200 aa)
          0.996
PBAL39_13934
Coagulation factor 5/8 type domain protein (703 aa)
 
   
    0.879
PBAL39_14999
Calx-beta domain protein (501 aa)
 
   
    0.843
PBAL39_24203
Beta-galactosidase (821 aa)
   
          0.696
PBAL39_00040
Putative exported alpha-L-fucosidase protein (414 aa)
 
   
    0.692
PBAL39_10786
Uncharacterized protein (474 aa)
 
   
    0.688
PBAL39_05448
Alpha-L-fucosidase, putative (713 aa)
 
   
    0.687
PBAL39_00627
Beta-galactosidase (959 aa)
   
          0.681
PBAL39_23963
Putative hydrolase (478 aa)
 
   
    0.677
PBAL39_14164
Probable glycosyl hydrolase (547 aa)
 
   
    0.672
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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