STRINGSTRING
EDM38879.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38879.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38879.1annotation not available (132 aa)    
Predicted Functional Partners:
EDM38878.1
annotation not available (82 aa)
              0.826
EDM38877.1
annotation not available (222 aa)
              0.826
EDM38876.1
annotation not available (25 aa)
              0.604
EDM37049.1
annotation not available (301 aa)
   
          0.530
EDM37047.1
Conserved protein found in conjugate transposon; COG3451 Type IV secretory pathway, VirB4 components (514 aa)
 
     
  0.402
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]