STRINGSTRING
PBAL39_22445 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22445" - No annotation available in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22445No annotation available (229 aa)    
Predicted Functional Partners:
PBAL39_22450
Transposase, IS21 family protein (517 aa)
     
  0.952
PBAL39_01642
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (520 aa)
     
  0.885
PBAL39_19090
Transposase (362 aa)
     
  0.880
PBAL39_14459
Transposase, IS21 family protein (517 aa)
     
  0.867
PBAL39_19095
Uncharacterized protein (155 aa)
 
     
  0.859
PBAL39_12007
DNA polymerase I (937 aa)
   
   
  0.675
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (668 aa)
       
  0.545
PBAL39_25460
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (477 aa)
     
 
  0.518
PBAL39_03624
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (490 aa)
     
 
  0.518
PBAL39_17654
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (696 aa)
         
  0.502
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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