STRINGSTRING
PBAL39_22455 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22455" - Putative DNA repair protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22455Putative DNA repair protein (83 aa)    
Predicted Functional Partners:
PBAL39_22450
Transposase, IS21 family protein (517 aa)
              0.580
PBAL39_12007
DNA polymerase I (937 aa)
     
 
  0.544
mutL
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (615 aa)
 
   
  0.522
PBAL39_22445
No annotation available (229 aa)
              0.466
PBAL39_24615
Formamidopyrimidine-DNA glycosylase (259 aa)
     
 
  0.458
maf
Maf-like protein maf (189 aa)
     
 
  0.452
PBAL39_10541
Ribonuclease G (503 aa)
     
      0.443
PBAL39_07150
Rod shape-determining protein (340 aa)
     
      0.443
PBAL39_21990
Cell division protein (388 aa)
     
      0.442
PBAL39_07170
Rod shape-determining protein (419 aa)
     
      0.442
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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