STRINGSTRING
PBAL39_22480 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22480" - DEAD/DEAH box helicase domain protein in Pedobacter sp. BAL39
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22480DEAD/DEAH box helicase domain protein (863 aa)    
Predicted Functional Partners:
PBAL39_22485
Uncharacterized protein (314 aa)
 
          0.972
fusA
Elongation factor G ; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (704 aa)
     
  0.948
PBAL39_12007
DNA polymerase I (937 aa)
     
  0.873
PBAL39_22475
Uncharacterized protein (313 aa)
              0.859
PBAL39_22470
Uncharacterized protein (99 aa)
              0.859
PBAL39_22465
Uncharacterized protein (258 aa)
              0.859
PBAL39_14794
RNA binding protein (107 aa)
     
    0.811
PBAL39_02317
RNA-binding protein (100 aa)
     
    0.811
PBAL39_13917
Putative peptidyl-prolyl cis-trans isomerase (245 aa)
       
    0.721
PBAL39_11692
Putative peptidyl-prolyl cis-trans isomerase (236 aa)
       
    0.721
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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