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STRINGSTRING
EDM38889.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38889.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38889.1annotation not available (362 aa)    
Predicted Functional Partners:
EDM38890.1
Uncharacterized protein; COG1715 Restriction endonuclease (298 aa)
              0.845
EDM38892.1
annotation not available (85 aa)
              0.665
EDM38891.1
Uncharacterized protein; COG1196 Chromosome segregation ATPases (672 aa)
              0.665
EDM38888.1
annotation not available (314 aa)
              0.494
EDM38887.1
DEAD/DEAH box helicase domain protein; COG4581 Superfamily II RNA helicase (863 aa)
              0.494
EDM38886.1
Uncharacterized protein; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (313 aa)
              0.494
EDM38885.1
annotation not available (99 aa)
              0.494
EDM38884.1
annotation not available (258 aa)
              0.494
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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