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STRINGSTRING
EDM38894.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38894.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38894.1annotation not available (171 aa)    
Predicted Functional Partners:
EDM38895.1
Uncharacterized protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins) (144 aa)
              0.845
EDM38893.1
annotation not available (224 aa)
              0.796
EDM38896.1
annotation not available (129 aa)
              0.742
EDM38897.1
annotation not available (199 aa)
              0.555
EDM38892.1
annotation not available (85 aa)
              0.435
EDM38891.1
Uncharacterized protein; COG1196 Chromosome segregation ATPases (672 aa)
              0.435
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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