STRINGSTRING
PBAL39_22585 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22585" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22585Putative outer membrane protein (1198 aa)    
Predicted Functional Partners:
PBAL39_22580
Putative lipoprotein (497 aa)
 
          0.955
PBAL39_22570
Uncharacterized protein (791 aa)
 
          0.859
PBAL39_24560
Uncharacterized protein (502 aa)
   
          0.778
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.778
PBAL39_16279
Uncharacterized protein (456 aa)
   
          0.778
PBAL39_10281
Uncharacterized protein (469 aa)
   
          0.778
PBAL39_03379
Uncharacterized protein (450 aa)
   
          0.778
PBAL39_23437
Putative lipoprotein (410 aa)
   
          0.777
PBAL39_14299
Uncharacterized protein (481 aa)
   
          0.777
PBAL39_12950
Uncharacterized protein (459 aa)
   
          0.777
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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