STRINGSTRING
EDM38927.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38927.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38927.1annotation not available (134 aa)    
Predicted Functional Partners:
EDM38926.1
Uncharacterized protein; COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 (111 aa)
 
          0.891
EDM38925.1
annotation not available (328 aa)
              0.826
EDM38923.1
annotation not available (70 aa)
 
          0.783
EDM38924.1
Rhodanese-like domain protein; COG0607 Rhodanese-related sulfurtransferase (124 aa)
 
          0.772
EDM38928.1
COG1309 Transcriptional regulator (194 aa)
 
          0.717
EDM37920.1
Uncharacterized protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases (325 aa)
   
          0.526
EDM36845.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (785 aa)
   
          0.496
EDM37860.1
COG0702 Predicted nucleoside-diphosphate-sugar epimerases (326 aa)
   
          0.485
EDM35949.1
Uncharacterized protein; COG2207 AraC-type DNA-binding domain-containing proteins (270 aa)
   
          0.441
EDM36844.1
annotation not available (249 aa)
   
          0.441
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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