STRINGSTRING
PBAL39_22710 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22710" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22710Uncharacterized protein (128 aa)    
Predicted Functional Partners:
PBAL39_22705
Phytoene dehydrogenase (483 aa)
              0.741
PBAL39_07540
Uncharacterized protein (160 aa)
   
          0.734
PBAL39_07375
Putative outer membrane protein (525 aa)
   
          0.688
PBAL39_02377
Uncharacterized protein (452 aa)
   
          0.641
PBAL39_18844
Putative outer membrane protein (1012 aa)
   
          0.630
PBAL39_18849
Putative outer membrane protein (551 aa)
   
          0.619
PBAL39_14404
Uncharacterized protein (552 aa)
   
          0.615
PBAL39_05383
Transporter, MFS superfamily protein (431 aa)
   
          0.606
PBAL39_10746
Uncharacterized protein (396 aa)
   
          0.604
PBAL39_18889
Alpha-mannosidase (879 aa)
   
          0.602
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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