STRINGSTRING
PBAL39_22755 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22755" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22755Uncharacterized protein (455 aa)    
Predicted Functional Partners:
PBAL39_22750
Outer membrane efflux protein (483 aa)
          0.987
PBAL39_22760
HlyB/MsbA family ABC transporter (335 aa)
 
          0.978
PBAL39_03339
Uncharacterized protein (116 aa)
   
          0.655
PBAL39_22765
Uncharacterized protein (111 aa)
              0.614
PBAL39_08976
TonB-dependent outer membrane receptor (759 aa)
   
          0.546
PBAL39_13487
Transcriptional regulator (149 aa)
   
          0.517
PBAL39_24715
Putative TonB-dependent outer membrane receptor protein (925 aa)
   
          0.483
PBAL39_15469
Uncharacterized protein (127 aa)
   
          0.476
PBAL39_18164
Outer membrane receptor for transport of vitamin B, putative (788 aa)
   
          0.456
PBAL39_07330
Putative outer membrane protein (1083 aa)
   
          0.432
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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