STRINGSTRING
PBAL39_22872 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22872" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22872Uncharacterized protein (358 aa)    
Predicted Functional Partners:
PBAL39_22877
Putative hydrolase (344 aa)
 
          0.810
PBAL39_22867
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (642 aa)
              0.692
PBAL39_22862
Two-component system sensor histidine kinase/response regulator hybrid (707 aa)
              0.692
PBAL39_22882
Putative outer membrane protein (511 aa)
              0.557
PBAL39_05383
Transporter, MFS superfamily protein (431 aa)
   
          0.549
PBAL39_21880
Transcriptional regulator (101 aa)
   
          0.547
PBAL39_22887
Putative outer membrane protein (1055 aa)
              0.520
PBAL39_14429
Putative dehydrogenase (461 aa)
   
          0.503
PBAL39_17904
Sulfur transfer protein involved in thiamine biosynthesis (77 aa)
   
          0.481
PBAL39_18889
Alpha-mannosidase (879 aa)
   
          0.480
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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