STRINGSTRING
PBAL39_22877 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22877" - Putative hydrolase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22877Putative hydrolase (344 aa)    
Predicted Functional Partners:
PBAL39_17274
Beta-xylosidase (1,4-beta-D-xylan xylosidase) (546 aa)
 
   
    0.835
PBAL39_22872
Uncharacterized protein (358 aa)
 
          0.810
PBAL39_20855
Arabinan endo-1,5-alpha-L-arabinosidase A (325 aa)
          0.804
PBAL39_21305
Putative endo-1,4-beta-xylanase (313 aa)
 
          0.722
PBAL39_12703
Putative beta-xylosidase (367 aa)
   
          0.717
PBAL39_19579
Uncharacterized protein (377 aa)
   
          0.676
PBAL39_24213
Arabinogalactan endo-beta-1,4-galactanase (348 aa)
   
          0.658
PBAL39_22882
Putative outer membrane protein (511 aa)
              0.646
PBAL39_22887
Putative outer membrane protein (1055 aa)
              0.613
PBAL39_22867
Two-component system sensor histidine kinase/response regulator, hybrid (’one-component system’) (642 aa)
              0.584
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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