STRINGSTRING
EDM35925.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35925.1" - COG3239 Fatty acid desaturase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35925.1COG3239 Fatty acid desaturase (360 aa)    
Predicted Functional Partners:
EDM38317.1
COG1012 NAD-dependent aldehyde dehydrogenases; In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family (876 aa)
         
  0.773
EDM38252.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins (2233 aa)
   
 
  0.676
EDM35727.1
Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase); COG1022 Long-chain acyl-CoA synthetases (AMP-forming) (590 aa)
     
 
  0.564
EDM37772.1
Probable oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating) (517 aa)
     
 
  0.533
EDM37228.1
Glycosyltransferase-distantly-related protein; COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase (328 aa)
       
    0.531
EDM36567.1
AMP-binding enzyme, putative; COG1022 Long-chain acyl-CoA synthetases (AMP-forming) (637 aa)
     
 
  0.529
EDM37769.1
Zinc-type alcohol dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases (385 aa)
     
 
    0.529
EDM36089.1
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (630 aa)
         
  0.524
EDM35445.1
COG1294 Cytochrome bd-type quinol oxidase, subunit 2 (339 aa)
 
   
    0.484
EDM35438.1
COG2120 Uncharacterized proteins, LmbE homologs (813 aa)
   
          0.451
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (8%) [HD]