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PBAL39_22997 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_22997" - Fatty acid desaturase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_22997Fatty acid desaturase (360 aa)    
Predicted Functional Partners:
PBAL39_22705
Phytoene dehydrogenase (483 aa)
 
 
  0.685
PBAL39_25510
Beta-carotene hydroxylase (160 aa)
 
   
    0.639
PBAL39_25490
Phytoene dehydrogenase (Phytoene desaturase) (500 aa)
 
 
  0.611
PBAL39_23567
Fatty acid desaturase (Stearoyl-CoA desaturase) (213 aa)
     
 
  0.569
PBAL39_15144
Probable oxidoreductase (517 aa)
     
 
  0.519
PBAL39_22992
Sensory transduction histidine kinase (653 aa)
     
      0.513
PBAL39_23002
Cold shock protein (63 aa)
   
        0.491
PBAL39_13747
Uncharacterized protein (155 aa)
   
          0.464
PBAL39_09606
Uncharacterized protein (100 aa)
   
          0.462
PBAL39_13280
Cytochrome bd ubiquinol oxidase, subunit I (440 aa)
       
    0.460
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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