STRINGSTRING
PBAL39_23022 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23022" - LmbE family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23022LmbE family protein (448 aa)    
Predicted Functional Partners:
PBAL39_23017
Uncharacterized protein (380 aa)
        0.986
PBAL39_23027
Uncharacterized protein (352 aa)
 
          0.951
PBAL39_23012
Probable galactosyltransferase (364 aa)
 
          0.918
PBAL39_23037
Uncharacterized protein (400 aa)
 
          0.833
PBAL39_23032
Uncharacterized protein (270 aa)
 
          0.711
PBAL39_03914
4-hydroxybenzoyl-CoA thioesterase domain protein (132 aa)
   
          0.590
PBAL39_13250
Uncharacterized protein (813 aa)
   
        0.534
PBAL39_06011
Uncharacterized protein (73 aa)
   
        0.534
PBAL39_23007
Sensory transduction histidine kinase (760 aa)
              0.525
PBAL39_21275
Uncharacterized protein (355 aa)
   
          0.460
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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