STRINGSTRING
PBAL39_23072 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23072" - NonF-related protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23072NonF-related protein (226 aa)    
Predicted Functional Partners:
PBAL39_25035
Inosine-5’-monophosphate dehydrogenase (489 aa)
     
  0.922
PBAL39_23067
Uncharacterized protein (100 aa)
              0.860
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
   
  0.782
PBAL39_19974
Uncharacterized protein (127 aa)
   
    0.728
PBAL39_16986
Dioxygenase (311 aa)
   
    0.728
PBAL39_11080
Putative glyoxalase family protein (130 aa)
   
    0.728
PBAL39_23062
Exodeoxyribonuclease III (Exonuclease III) (260 aa)
   
        0.639
PBAL39_24390
NAD+-dependent aldehyde dehydrogenase (512 aa)
     
  0.638
PBAL39_17539
Succinate-semialdehyde dehydrogenase (457 aa)
     
  0.638
PBAL39_08240
Delta-1-pyrroline-5-carboxylate dehydrogenase (544 aa)
     
  0.638
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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