STRINGSTRING
PBAL39_23087 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23087" - Beta-mannosidase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23087Beta-mannosidase (1016 aa)    
Predicted Functional Partners:
PBAL39_18889
Alpha-mannosidase (879 aa)
 
   
  0.786
PBAL39_22942
Alpha-galactosidase (684 aa)
   
   
    0.775
PBAL39_10786
Uncharacterized protein (474 aa)
 
   
  0.762
PBAL39_14429
Putative dehydrogenase (461 aa)
   
 
  0.757
PBAL39_14384
Uncharacterized protein (458 aa)
   
          0.757
PBAL39_06746
Uncharacterized protein (460 aa)
   
          0.756
PBAL39_18884
Uncharacterized protein (462 aa)
 
          0.746
PBAL39_20930
Alpha-galactosidase (Melibiase) (731 aa)
 
   
  0.745
PBAL39_06736
Putative outer membrane protein (659 aa)
   
          0.729
PBAL39_13145
Putative outer membrane protein (1110 aa)
   
          0.725
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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