STRINGSTRING
PBAL39_23107 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23107" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23107Uncharacterized protein (202 aa)    
Predicted Functional Partners:
PBAL39_08616
Putative lipoprotein (337 aa)
   
          0.753
PBAL39_20194
Putative outer membrane protein (1135 aa)
   
          0.743
PBAL39_20189
Uncharacterized protein (470 aa)
   
          0.726
PBAL39_16776
Putative outer membrane protein (516 aa)
   
          0.722
PBAL39_16866
Outer membrane protein, putative (1160 aa)
   
          0.699
PBAL39_15474
Uncharacterized protein (261 aa)
   
          0.690
PBAL39_22902
Outer membrane receptor ragA protein (854 aa)
   
          0.684
PBAL39_12207
Uncharacterized protein (213 aa)
   
          0.678
PBAL39_14819
Uncharacterized protein (505 aa)
   
          0.676
PBAL39_20304
Putative outer membrane protein (1123 aa)
   
          0.654
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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