STRINGSTRING
PBAL39_23227 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23227" - Peroxiredoxin in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23227Peroxiredoxin (154 aa)    
Predicted Functional Partners:
PBAL39_11722
Peroxiredoxin (181 aa)
 
 
  0.875
rpmI
50S ribosomal protein L35 (66 aa)
     
        0.738
PBAL39_20900
Cell-division inhibitor (308 aa)
   
        0.696
PBAL39_11285
Uncharacterized protein (117 aa)
   
        0.696
PBAL39_04214
Uncharacterized protein (302 aa)
   
        0.696
PBAL39_03609
Uncharacterized protein (258 aa)
     
        0.692
PBAL39_00852
Uncharacterized protein (489 aa)
     
        0.692
PBAL39_23232
dTDP-4-dehydrorhamnose reductase (304 aa)
              0.629
PBAL39_19310
Peroxiredoxin (211 aa)
 
 
0.627
PBAL39_12342
Indole-3-glycerol phosphate synthase (132 aa)
   
 
    0.613
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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