STRINGSTRING
PBAL39_23327 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23327" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23327Uncharacterized protein (256 aa)    
Predicted Functional Partners:
PBAL39_23332
Putative RNA polymerase ECF-type sigma factor (177 aa)
              0.859
PBAL39_23322
Uncharacterized protein (279 aa)
              0.840
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (340 aa)
              0.574
PBAL39_23337
Uncharacterized protein (181 aa)
              0.574
PBAL39_23357
Integral membrane sensor signal transduction histidine kinase (288 aa)
              0.415
PBAL39_23352
Two component transcriptional regulator, winged helix family protein (234 aa)
              0.415
PBAL39_23347
Uncharacterized protein (174 aa)
              0.415
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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