STRINGSTRING
PBAL39_23382 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23382" - Putative hydrolase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PBAL39_23382Putative hydrolase (275 aa)    
Predicted Functional Partners:
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (220 aa)
 
            0.714
PBAL39_13747
Uncharacterized protein (155 aa)
   
          0.667
PBAL39_05533
Uncharacterized protein (337 aa)
   
          0.596
PBAL39_13502
Methyltransferase (243 aa)
   
          0.595
hemA
Glutamyl-tRNA reductase ; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) (408 aa)
              0.587
PBAL39_09556
JmjC domain protein (303 aa)
   
          0.578
PBAL39_09561
JmjC domain protein (293 aa)
   
          0.560
PBAL39_08445
30S ribosomal protein S10 (231 aa)
   
          0.549
hemC
Pre-uroporphyrinogen synthase ; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (526 aa)
              0.535
PBAL39_05813
Uncharacterized protein (115 aa)
   
          0.506
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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