STRINGSTRING
PBAL39_23397 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23397" - Membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23397Membrane protein (460 aa)    
Predicted Functional Partners:
PBAL39_23402
Ferrichrome-iron receptor (801 aa)
 
        0.960
PBAL39_10880
Ferrichrome iron receptor (809 aa)
 
        0.765
PBAL39_03334
Ferrichrome iron receptor (778 aa)
 
        0.736
PBAL39_17244
Putative iron-regulated transmembrane protein (246 aa)
   
          0.721
PBAL39_18809
Ferrichrome-iron receptor (904 aa)
 
        0.618
PBAL39_13200
Pyridoxal-5’-phosphate-dependent enzyme, beta subunit (349 aa)
   
   
    0.590
PBAL39_00300
TonB-dependent siderophore receptor (813 aa)
 
        0.581
PBAL39_16139
Uncharacterized protein (294 aa)
   
          0.512
PBAL39_07550
Uncharacterized protein (808 aa)
 
        0.501
PBAL39_07790
Uncharacterized protein (418 aa)
 
          0.493
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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