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PBAL39_23452 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23452" - RNA polymerase ECF-type sigma factor in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23452RNA polymerase ECF-type sigma factor (196 aa)    
Predicted Functional Partners:
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (618 aa)
              0.862
PBAL39_00255
RNA polymerase, sigma-E factor heat shock and oxidative stress (190 aa)
   
          0.756
PBAL39_07205
Putative anti-sigma factor (328 aa)
 
 
  0.663
PBAL39_06056
Putative anti-sigma factor (341 aa)
 
 
  0.660
PBAL39_16871
Putative anti-sigma factor (343 aa)
 
 
  0.655
PBAL39_18704
Putative anti-sigma factor (321 aa)
 
 
  0.655
PBAL39_22110
Putative anti-sigma factor (322 aa)
 
 
  0.649
PBAL39_16791
RNA polymerase ECF-type sigma factor (208 aa)
   
          0.634
PBAL39_23447
Putative anti-sigma factor (397 aa)
              0.614
PBAL39_25610
Putative transmembrane sensor/regulatory protein (335 aa)
   
 
  0.601
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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