STRINGSTRING
PBAL39_23462 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23462" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23462Uncharacterized protein (206 aa)    
Predicted Functional Partners:
PBAL39_23467
Uncharacterized protein (311 aa)
              0.859
PBAL39_23472
Uncharacterized protein (276 aa)
              0.646
PBAL39_09891
PKD (1990 aa)
   
          0.635
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
              0.587
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.548
PBAL39_09931
Uncharacterized protein (290 aa)
 
          0.546
PBAL39_23452
RNA polymerase ECF-type sigma factor (196 aa)
              0.510
PBAL39_09911
Uncharacterized protein (447 aa)
 
          0.493
PBAL39_09941
Uncharacterized protein (247 aa)
   
          0.484
PBAL39_09926
Uncharacterized protein (250 aa)
 
          0.481
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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