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PBAL39_23477 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23477" - Oxidoreductase, short chain dehydrogenase/reductase family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23477Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)    
Predicted Functional Partners:
PBAL39_23472
Uncharacterized protein (276 aa)
              0.775
PBAL39_20144
Uncharacterized protein (121 aa)
   
          0.768
PBAL39_05428
Oxidoreductase (254 aa)
   
          0.742
PBAL39_23482
ABC transporter, permease (244 aa)
              0.615
PBAL39_24163
Short-chain dehydrogenase (271 aa)
   
          0.615
PBAL39_23487
ABC transporter, ATP-binding protein (250 aa)
              0.613
PBAL39_23467
Uncharacterized protein (311 aa)
              0.592
PBAL39_12885
Putative short-chain dehydrogenase (111 aa)
   
          0.592
PBAL39_23462
Uncharacterized protein (206 aa)
              0.587
PBAL39_23492
Possible oxidoreductase (294 aa)
              0.570
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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