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PBAL39_23482 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23482" - ABC transporter, permease in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23482ABC transporter, permease (244 aa)    
Predicted Functional Partners:
PBAL39_23487
ABC transporter, ATP-binding protein (250 aa)
 
 
  0.998
PBAL39_18234
ABC-type organic solvent transporter, ATP-binding protein (257 aa)
 
 
  0.961
PBAL39_01007
ABC transporter-related permease with MCE domain (306 aa)
 
   
    0.947
PBAL39_18239
ABC transporter, permease component (332 aa)
 
   
    0.908
PBAL39_18229
ABC transporter, permease (269 aa)
   
   
 
0.865
PBAL39_23492
Possible oxidoreductase (294 aa)
              0.829
PBAL39_04039
ABC transporter, ATP-binding protein (244 aa)
 
   
    0.656
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
              0.615
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
 
        0.540
PBAL39_23472
Uncharacterized protein (276 aa)
              0.536
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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