Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
ABC transporter, ATP-binding protein (250 aa)
Predicted Functional Partners:
ABC transporter, permease (244 aa)
ABC transporter, permease (269 aa)
ABC transporter-related permease with MCE domain (306 aa)
ABC transporter, permease component (332 aa)
Possible oxidoreductase (294 aa)
ABC-type organic solvent transporter, ATP-binding protein (257 aa)
ABC transporter, ATP-binding protein (244 aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (333 aa)
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (320 aa)
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596 Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39