STRINGSTRING
PBAL39_23492 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23492" - Possible oxidoreductase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23492Possible oxidoreductase (294 aa)    
Predicted Functional Partners:
PBAL39_23487
ABC transporter, ATP-binding protein (250 aa)
              0.829
PBAL39_23482
ABC transporter, permease (244 aa)
              0.829
PBAL39_12643
Putative tRNA/rRNA methyltransferase (249 aa)
 
      0.717
PBAL39_23477
Oxidoreductase, short chain dehydrogenase/reductase family protein (229 aa)
              0.570
PBAL39_10136
Predicted N6-adenine-specific DNA methylase (393 aa)
   
 
  0.526
PBAL39_23472
Uncharacterized protein (276 aa)
              0.520
PBAL39_02112
Putative SpoU rRNA methylase family protein (219 aa)
   
      0.512
PBAL39_01647
Putative tRNA-rRNA methyltransferase (255 aa)
   
      0.512
PBAL39_12007
DNA polymerase I (937 aa)
   
      0.485
PBAL39_08010
Ribosomal large subunit pseudouridine synthase D (228 aa)
 
 
  0.456
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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