STRINGSTRING
PBAL39_23497 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23497" - Lipoprotein, putative in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23497Lipoprotein, putative (334 aa)    
Predicted Functional Partners:
PBAL39_16124
Uncharacterized protein (436 aa)
   
          0.695
PBAL39_25640
Uncharacterized protein (194 aa)
   
          0.637
PBAL39_14489
Uncharacterized protein (130 aa)
   
          0.635
PBAL39_24775
Bacterial Ig-like domain protein (1193 aa)
   
          0.579
PBAL39_05463
Uncharacterized protein (258 aa)
   
          0.564
PBAL39_00937
Putative ABC transport system, ATP-binding protein (581 aa)
   
          0.534
PBAL39_13457
Uncharacterized protein (148 aa)
   
          0.509
PBAL39_05818
Uncharacterized protein (137 aa)
   
          0.480
PBAL39_19205
Uncharacterized protein (171 aa)
   
          0.440
PBAL39_00922
Uncharacterized protein (159 aa)
   
          0.432
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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