STRINGSTRING
PBAL39_23542 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23542" - Outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23542Outer membrane protein (763 aa)    
Predicted Functional Partners:
PBAL39_23537
Uncharacterized protein (1746 aa)
 
          0.976
PBAL39_23547
Uncharacterized protein (348 aa)
              0.863
PBAL39_23532
Cytidine deaminase (162 aa)
              0.639
PBAL39_19305
Uncharacterized protein (999 aa)
   
          0.631
PBAL39_11095
Uncharacterized protein (156 aa)
   
          0.621
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.608
PBAL39_25605
Uncharacterized protein (1095 aa)
   
          0.599
PBAL39_14419
Putative outer membrane protein (1027 aa)
   
          0.599
PBAL39_05458
Uncharacterized protein (186 aa)
   
          0.594
PBAL39_03789
Possible xylosidase/arabinosidase (565 aa)
   
          0.590
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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