STRINGSTRING
PBAL39_23572 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_23572" - Phosphomannose isomerase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_23572Phosphomannose isomerase (165 aa)    
Predicted Functional Partners:
PBAL39_23567
Fatty acid desaturase (Stearoyl-CoA desaturase) (213 aa)
              0.499
PBAL39_05578
Tricorn protease homolog ; Degrades oligopeptides (1073 aa)
   
          0.490
PBAL39_12302
Putative glycerophosphodiester phosphodiesterase (331 aa)
   
          0.478
PBAL39_22065
PfkB domain protein (305 aa)
   
   
    0.435
PBAL39_01282
Uncharacterized protein (355 aa)
   
          0.435
PBAL39_09236
Uncharacterized protein (288 aa)
   
          0.434
PBAL39_08976
TonB-dependent outer membrane receptor (759 aa)
   
          0.412
PBAL39_07715
Putative secreted protein (543 aa)
   
          0.410
PBAL39_18394
Putative carboxypeptidase (Putative secreted protein) (396 aa)
   
          0.407
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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